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sklearndf

Data frame support and feature traceability for `scikit-learn`.

With conditionsPyPI Scientific/EngineeringReleased Sep 202585.6K downloads / moApache Software License v2.0Pure Python

Decision gist · record as of 2026-08-14

pure-Python wheel — sklearndf-2.4.2-py3-none-any.whl
v2.4.2 · released 2025-09-03 · Python <4a,>=3.9 · 6 runtime deps: gamma-pytools, numpy, packaging, pandas, scikit-learn, scipy

Yes, if you work regularly with scikit-learn pipelines and need to preserve feature names and traceability. The library is stable, has low install friction, and solves a genuine pain point in scikit-learn workflows. Maintenance is aging (last release 345 days ago), so verify compatibility with your scikit-learn version before adopting in new projects. No known security vulnerabilities.AI-flagged interpretation of the facts on this page — verify before relying

Before you install

  • Requires Python >=3.9 and <4a; scikit-learn, pandas, scipy, numpy, and packaging must be installed.
  • Low install friction with a pure-Python wheel.
  • Maintenance is aging—last release was 345 days ago—but the repository remains active and marked Production/Stable.

License · maintenance · safety

Apache Software License v2.0 (permissive) — Licensed under Apache Software License v2.0 (permissive). You may use, modify, and distribute freely in commercial and private projects, provided you include a copy of the license and state significant changes.

last release 2025-09-03 (345 days) · last repo commit 2026-02-10 · 62 stars

0 known vulnerabilities (OSV.dev, 2026-08-14) · 85,647 downloads/mo, #13,910 on PyPI

Verify before relying

pip install sklearndf

from sklearndf.preprocessing import StandardScalerDF
import pandas as pd

X = pd.DataFrame({'a': [2, 3], 'b': [4, 5]})
scaler = StandardScalerDF()
X_scaled = scaler.fit_transform(X)  # Returns DataFrame with feature names preserved
  • Whether feature tracing works correctly across all scikit-learn transformer types and custom pipelines.
  • Performance overhead of DataFrame wrapping compared to native scikit-learn arrays.
  • Compatibility with recent scikit-learn versions beyond those explicitly tested.
Same gist for agents: .md · .json

What it is and what it does

sklearndf is a wrapper library that enhances scikit-learn estimators to preserve pandas DataFrames and feature names through transformations. When you use scikit-learn's transformers, they typically return numpy arrays even if your input was a DataFrame, losing column names in the process. This makes it hard to trace which features went where, especially in complex pipelines with feature engineering steps. sklearndf solves this by providing drop-in replacements (e.g., StandardScalerDF instead of StandardScaler) that return DataFrames with feature names intact.

The library depends on numpy, pandas, scipy, scikit-learn, packaging, and gamma-pytools. It supports Python 3.9 through 3.13 and is marked Production/Stable. The main value is in model inspection and debugging: you can see exactly which original features contributed to each output feature, which is crucial when transformers create new features (like one-hot encoding) or when you need to audit a pipeline's behavior.

Use it for

  • Inspect and debug scikit-learn pipelines by keeping track of feature names through all transformation steps.
  • One-hot encode categorical features while maintaining a clear mapping from encoded columns back to original features.
  • Audit feature engineering in production models to understand which raw inputs drive each final feature.
  • Build interpretable machine learning workflows where feature lineage is essential for model validation.
  • Integrate scikit-learn into data analysis notebooks where preserving DataFrame structure simplifies downstream exploration.

Worth the install?

AI-flagged interpretation of the facts on this page. Verify before relying on it.

With conditions

Yes, if you work regularly with scikit-learn pipelines and need to preserve feature names and traceability.

The library is stable, has low install friction, and solves a genuine pain point in scikit-learn workflows. Maintenance is aging (last release 345 days ago), so verify compatibility with your scikit-learn version before adopting in new projects. No known security vulnerabilities.

Install

sklearndf on PyPI

Before you install

Low install friction with a pure-Python wheel. Maintenance is aging—last release was 345 days ago—but the repository remains active and marked Production/Stable. Depends on well-established libraries: numpy, pandas, scipy, scikit-learn, packaging, and gamma-pytools.

Requires Python >=3.9 and <4a; scikit-learn, pandas, scipy, numpy, and packaging must be installed.

License in practice

Licensed under Apache Software License v2.0 (permissive). You may use, modify, and distribute freely in commercial and private projects, provided you include a copy of the license and state significant changes.

Quickstart

pip install sklearndf

from sklearndf.preprocessing import StandardScalerDF
import pandas as pd

X = pd.DataFrame({'a': [2, 3], 'b': [4, 5]})
scaler = StandardScalerDF()
X_scaled = scaler.fit_transform(X)  # Returns DataFrame with feature names preserved

Verify before relying

  • Whether feature tracing works correctly across all scikit-learn transformer types and custom pipelines.
  • Performance overhead of DataFrame wrapping compared to native scikit-learn arrays.
  • Compatibility with recent scikit-learn versions beyond those explicitly tested.

Package facts

LicenseApache Software License v2.0 permissive
Python supportSupports the current Python release <4a,>=3.9
Install frictionLow. Pure-Python wheel
Runtime dependencies
6 packages
gamma-pytoolsnumpypackagingpandasscikit-learnscipy
MaintenanceAging 345 days since the last release
Last repo commit
First released
Downloads85,647 / month, #13,910 on PyPI 30-day window, as of 2026-08-14
Known vulnerabilitiesNone known OSV.dev, checked 2026-08-14
Classifiers
Development Status :: 5 - Production/StableIntended Audience :: Science/ResearchLicense :: OSI Approved :: Apache Software LicenseOperating System :: MacOSOperating System :: Microsoft :: WindowsOperating System :: POSIX :: LinuxOperating System :: UnixProgramming Language :: PythonProgramming Language :: Python :: 3Programming Language :: Python :: 3.10Programming Language :: Python :: 3.11Programming Language :: Python :: 3.12Programming Language :: Python :: 3.13Topic :: Scientific/Engineering

Evidence: sklearndf-2.4.2-py3-none-any.whl

Tags

Capabilities
scikit-learn dataframe outputpreserve feature names sklearnfeature tracing machine learningsklearn transformer pandasfeature name tracking pipelinedataframe-aware scikit-learnsklearn feature lineage
Topics
scikit-learn-wrapperfeature-tracingdataframe-preservation

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See also sklearn-pandas · skops · datasieve · sklearn-compat · sklearn2pmml · sklearn-crfsuite · scikit-learn-stubs · sagemaker-scikit-learn-extension · category-encoders