{"categories":[{"label":"Build Tools","url":"https://skillfed.io/packages/category/software-development-build-tools/3"}],"enrichment":{"capability":"Decodes and encodes the macromolecular transmission format (MMTF), a binary encoding for biological structures, and provides a Python API to fetch and inspect PDB structure data.","skillfed_tags":["bioinformatics","structural-biology","pdb-format"],"use_cases":["Fetch and analyze PDB protein structures programmatically by structure ID","Extract atomic charge information and group properties from biological structures","Count chains and bioassemblies in a protein structure for structural analysis","Decode MMTF binary files into Python objects for computational biology workflows","Build bioinformatics pipelines that need lightweight, standardized structure data access"],"what_it_does":"mmtf-python is a library for working with the macromolecular transmission format (MMTF), a binary encoding standard for biological structures maintained by the Protein Data Bank (PDB). It provides both encoding and decoding capabilities, plus a convenience API to fetch structure data directly from PDB by structure ID.\n\nThe package lets you load PDB structures into Python as decoded objects with properties like structure_id, num_chains, group_list (atomic information), and bio_assembly data. It depends only on msgpack for binary serialization. The library is stable and production-ready according to its classifier, but development has stalled since mid-2022 with no recent commits or releases.","worth_installing":"Yes, if you need to work with PDB structures in Python and can tolerate an unmaintained package. The library is stable, has no known vulnerabilities, and a single lightweight dependency. However, be aware that it will not receive updates for Python version incompatibilities or format changes. Suitable for read-only structure analysis in established workflows, but risky for new projects expecting long-term support."},"id":"mmtf-python","links":{"html":"https://skillfed.io/packages/mmtf-python","md":"https://skillfed.io/packages/mmtf-python.md","pypi":"https://pypi.org/project/mmtf-python/"},"maintenance":{"status":"abandoned"},"meta":{"latest_release":"2022-07-06","license_spdx":null,"license_treatment":"permissive","name":"mmtf-python","python_support":"unspecified","summary":"A decoding libary for the PDB mmtf format"},"popularity":{"monthly_downloads":290159,"position":7993,"tier":"top_15000"},"security":{"n_vulnerabilities":0},"version":"1.1.3"}